Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC8.9□□□□□ -0.98
APOBP04114 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC8.9□□□□□ -0.98
APOBP04114 GPX3-202ENST00000517973 612 ntTSL 3 BASIC8.9□□□□□ -0.98
APOBP04114 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC8.9□□□□□ -0.98
APOBP04114 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC8.9□□□□□ -0.98
APOBP04114 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC8.9□□□□□ -0.98
APOBP04114 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC8.9□□□□□ -0.98
APOBP04114 RN7SL602P-201ENST00000578326 324 ntBASIC8.9□□□□□ -0.98
APOBP04114 RN7SL718P-201ENST00000581254 303 ntBASIC8.9□□□□□ -0.98
APOBP04114 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
APOBP04114 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
APOBP04114 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
APOBP04114 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
APOBP04114 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
APOBP04114 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
APOBP04114 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
APOBP04114 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
APOBP04114 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC8.9□□□□□ -0.99
APOBP04114 AC099328.1-201ENST00000498809 1030 ntBASIC8.9□□□□□ -0.99
APOBP04114 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC8.9□□□□□ -0.99
APOBP04114 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
APOBP04114 HNRNPA1P16-201ENST00000575692 955 ntBASIC8.9□□□□□ -0.99
APOBP04114 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
APOBP04114 AC021321.1-201ENST00000607397 1113 ntBASIC8.9□□□□□ -0.99
APOBP04114 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC8.9□□□□□ -0.99
APOBP04114 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
APOBP04114 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC8.9□□□□□ -0.99
APOBP04114 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC8.9□□□□□ -0.99
APOBP04114 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 AC084018.2-201ENST00000613093 2607 ntBASIC8.89□□□□□ -0.99
APOBP04114 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 SF1-209ENST00000433274 2317 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC8.89□□□□□ -0.99
APOBP04114 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC8.89□□□□□ -0.99
APOBP04114 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 RN7SL455P-201ENST00000580629 282 ntBASIC8.89□□□□□ -0.99
APOBP04114 NAT9-219ENST00000582524 573 ntTSL 4 BASIC8.89□□□□□ -0.99
APOBP04114 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC8.89□□□□□ -0.99
APOBP04114 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC8.89□□□□□ -0.99
APOBP04114 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
APOBP04114 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC8.89□□□□□ -0.99
APOBP04114 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 ACE3P-201ENST00000423435 1973 ntBASIC8.89□□□□□ -0.99
APOBP04114 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC8.89□□□□□ -0.99
APOBP04114 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC8.89□□□□□ -0.99
APOBP04114 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 PRORSD1P-202ENST00000563365 2154 ntBASIC8.89□□□□□ -0.99
APOBP04114 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
APOBP04114 HNRNPA1P10-201ENST00000444945 962 ntBASIC8.89□□□□□ -0.99
APOBP04114 AC093300.1-201ENST00000510368 1201 ntBASIC8.89□□□□□ -0.99
APOBP04114 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC8.89□□□□□ -0.99
APOBP04114 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC8.89□□□□□ -0.99
APOBP04114 DERL2-206ENST00000572834 589 ntTSL 3 BASIC8.89□□□□□ -0.99
APOBP04114 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 AC104506.1-201ENST00000609247 429 ntBASIC8.89□□□□□ -0.99
APOBP04114 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC8.89□□□□□ -0.99
APOBP04114 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC8.89□□□□□ -0.99
APOBP04114 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC8.89□□□□□ -0.99
APOBP04114 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC8.89□□□□□ -0.99
APOBP04114 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
APOBP04114 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC8.89□□□□□ -0.99
APOBP04114 CDK4P1-201ENST00000454213 828 ntBASIC8.89□□□□□ -0.99
APOBP04114 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC8.89□□□□□ -0.99
APOBP04114 AL359219.1-201ENST00000556311 934 ntBASIC8.89□□□□□ -0.99
APOBP04114 MAX-218ENST00000557746 571 ntTSL 4 BASIC8.89□□□□□ -0.99
APOBP04114 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms