Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ALX3O95076 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 AC007787.1-201ENST00000588095 1583 ntBASIC13.25□□□□□ -0.29
ALX3O95076 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.25□□□□□ -0.29
ALX3O95076 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ALX3O95076 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.25□□□□□ -0.29
ALX3O95076 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ALX3O95076 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.25□□□□□ -0.29
ALX3O95076 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.25□□□□□ -0.29
ALX3O95076 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.25□□□□□ -0.29
ALX3O95076 SDHAP3-202ENST00000515467 728 ntBASIC13.25□□□□□ -0.29
ALX3O95076 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.25□□□□□ -0.29
ALX3O95076 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.25□□□□□ -0.29
ALX3O95076 ZNF890P-202ENST00000530367 1156 ntBASIC13.25□□□□□ -0.29
ALX3O95076 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ALX3O95076 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.25□□□□□ -0.29
ALX3O95076 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.25□□□□□ -0.29
ALX3O95076 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALX3O95076 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.25□□□□□ -0.29
ALX3O95076 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ALX3O95076 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ALX3O95076 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.24□□□□□ -0.29
ALX3O95076 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.24□□□□□ -0.29
ALX3O95076 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ALX3O95076 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ALX3O95076 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ALX3O95076 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ALX3O95076 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ALX3O95076 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 AC004945.1-201ENST00000416738 983 ntBASIC13.24□□□□□ -0.29
ALX3O95076 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.24□□□□□ -0.29
ALX3O95076 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.24□□□□□ -0.29
ALX3O95076 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.24□□□□□ -0.29
ALX3O95076 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.24□□□□□ -0.29
ALX3O95076 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.24□□□□□ -0.29
ALX3O95076 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.24□□□□□ -0.29
ALX3O95076 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.24□□□□□ -0.29
ALX3O95076 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.24□□□□□ -0.29
ALX3O95076 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.24□□□□□ -0.29
ALX3O95076 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.24□□□□□ -0.29
ALX3O95076 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.24□□□□□ -0.29
ALX3O95076 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ALX3O95076 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ALX3O95076 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms