Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC19.08■□□□□ 0.64
LTN1O94822 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC19.08■□□□□ 0.64
LTN1O94822 MIR6074-201ENST00000612054 107 ntBASIC19.08■□□□□ 0.64
LTN1O94822 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LTN1O94822 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LTN1O94822 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LTN1O94822 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LTN1O94822 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
LTN1O94822 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LTN1O94822 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LTN1O94822 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC19.07■□□□□ 0.64
LTN1O94822 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LTN1O94822 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LTN1O94822 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LTN1O94822 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LTN1O94822 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.07■□□□□ 0.64
LTN1O94822 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LTN1O94822 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC19.07■□□□□ 0.64
LTN1O94822 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC19.07■□□□□ 0.64
LTN1O94822 AC012073.1-201ENST00000606114 1108 ntBASIC19.07■□□□□ 0.64
LTN1O94822 HPX-213ENST00000615166 826 ntTSL 5 BASIC19.07■□□□□ 0.64
LTN1O94822 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LTN1O94822 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LTN1O94822 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LTN1O94822 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.07■□□□□ 0.64
LTN1O94822 LINC00115-201ENST00000473798 1317 ntBASIC19.07■□□□□ 0.64
LTN1O94822 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LTN1O94822 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.07■□□□□ 0.64
LTN1O94822 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LTN1O94822 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LTN1O94822 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LTN1O94822 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LTN1O94822 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LTN1O94822 AMT-256ENST00000638063 1783 ntTSL 5 BASIC19.07■□□□□ 0.64
LTN1O94822 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 AC234644.1-201ENST00000406065 370 ntBASIC19.06■□□□□ 0.64
LTN1O94822 BX679664.3-201ENST00000414070 555 ntBASIC19.06■□□□□ 0.64
LTN1O94822 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC19.06■□□□□ 0.64
LTN1O94822 GCSHP3-201ENST00000431120 391 ntBASIC19.06■□□□□ 0.64
LTN1O94822 AC113935.1-201ENST00000471722 555 ntBASIC19.06■□□□□ 0.64
LTN1O94822 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.06■□□□□ 0.64
LTN1O94822 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC19.06■□□□□ 0.64
LTN1O94822 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
LTN1O94822 LINC00244-201ENST00000625073 613 ntBASIC19.06■□□□□ 0.64
LTN1O94822 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.06■□□□□ 0.64
LTN1O94822 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.06■□□□□ 0.64
LTN1O94822 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC19.06■□□□□ 0.64
LTN1O94822 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.06■□□□□ 0.64
LTN1O94822 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LTN1O94822 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.06■□□□□ 0.64
LTN1O94822 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 AC011498.7-201ENST00000624986 2027 ntBASIC19.06■□□□□ 0.64
LTN1O94822 AC232323.1-201ENST00000540724 2099 ntBASIC19.06■□□□□ 0.64
LTN1O94822 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC19.06■□□□□ 0.64
LTN1O94822 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LTN1O94822 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC19.06■□□□□ 0.64
LTN1O94822 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LTN1O94822 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
LTN1O94822 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LTN1O94822 BCAS2P2-201ENST00000425064 674 ntBASIC19.06■□□□□ 0.64
LTN1O94822 KRT18P46-201ENST00000435568 1279 ntBASIC19.06■□□□□ 0.64
LTN1O94822 GRPEL2P1-201ENST00000453145 339 ntBASIC19.06■□□□□ 0.64
LTN1O94822 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC19.06■□□□□ 0.64
LTN1O94822 AC006529.1-201ENST00000459978 637 ntBASIC19.06■□□□□ 0.64
LTN1O94822 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LTN1O94822 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LTN1O94822 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC19.06■□□□□ 0.64
LTN1O94822 AL118516.1-201ENST00000564152 670 ntBASIC19.06■□□□□ 0.64
LTN1O94822 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
LTN1O94822 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LTN1O94822 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LTN1O94822 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC19.06■□□□□ 0.64
LTN1O94822 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LTN1O94822 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LTN1O94822 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LTN1O94822 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LTN1O94822 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LTN1O94822 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LTN1O94822 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LTN1O94822 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LTN1O94822 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LTN1O94822 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.05■□□□□ 0.64
LTN1O94822 RNVU1-8-201ENST00000364272 125 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms