Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
GPC4O75487 AL139094.1-201ENST00000405549 1188 ntBASIC14.97□□□□□ -0.01
GPC4O75487 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 AC114812.1-204ENST00000449669 728 ntBASIC14.97□□□□□ -0.01
GPC4O75487 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.97□□□□□ -0.01
GPC4O75487 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.97□□□□□ -0.01
GPC4O75487 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
GPC4O75487 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.97□□□□□ -0.01
GPC4O75487 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC4O75487 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC4O75487 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC4O75487 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
GPC4O75487 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.96□□□□□ -0.01
GPC4O75487 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
GPC4O75487 BX640514.1-201ENST00000583223 1918 ntBASIC14.96□□□□□ -0.01
GPC4O75487 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
GPC4O75487 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 AL035633.1-201ENST00000406139 838 ntBASIC14.96□□□□□ -0.01
GPC4O75487 KRT8P14-201ENST00000414254 1442 ntBASIC14.96□□□□□ -0.01
GPC4O75487 ACTG1P3-201ENST00000431775 1114 ntBASIC14.96□□□□□ -0.01
GPC4O75487 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
GPC4O75487 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.96□□□□□ -0.01
GPC4O75487 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 RN7SL692P-201ENST00000464677 288 ntBASIC14.96□□□□□ -0.01
GPC4O75487 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
GPC4O75487 AC022137.2-201ENST00000503482 481 ntBASIC14.96□□□□□ -0.01
GPC4O75487 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.96□□□□□ -0.01
GPC4O75487 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC4O75487 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
GPC4O75487 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.96□□□□□ -0.01
GPC4O75487 AC018529.2-202ENST00000611482 3087 ntBASIC14.96□□□□□ -0.01
GPC4O75487 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
GPC4O75487 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC4O75487 AL358472.5-202ENST00000641448 1267 ntBASIC14.96□□□□□ -0.01
GPC4O75487 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
GPC4O75487 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC4O75487 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.96□□□□□ -0.02
GPC4O75487 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
GPC4O75487 LILRP1-201ENST00000444199 1370 ntBASIC14.96□□□□□ -0.02
GPC4O75487 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.96□□□□□ -0.02
GPC4O75487 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.96□□□□□ -0.02
GPC4O75487 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GPC4O75487 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.96□□□□□ -0.02
GPC4O75487 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GPC4O75487 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GPC4O75487 AC113367.3-201ENST00000508316 1912 ntBASIC14.96□□□□□ -0.02
GPC4O75487 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms