Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CPNE3O75131 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.36□□□□□ -0.11
CPNE3O75131 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE3O75131 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 HLA-K-203ENST00000430151 1046 ntBASIC14.35□□□□□ -0.11
CPNE3O75131 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE3O75131 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE3O75131 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.35□□□□□ -0.11
CPNE3O75131 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 AC104982.3-201ENST00000581995 514 ntBASIC14.35□□□□□ -0.11
CPNE3O75131 MIR3615-201ENST00000581999 87 ntBASIC14.35□□□□□ -0.11
CPNE3O75131 PPY2P-201ENST00000582808 702 ntBASIC14.35□□□□□ -0.11
CPNE3O75131 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 ZACNP1-201ENST00000612259 710 ntBASIC14.35□□□□□ -0.11
CPNE3O75131 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 AC117489.1-201ENST00000625169 3217 ntBASIC14.35□□□□□ -0.11
CPNE3O75131 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 AL023775.1-201ENST00000454907 1746 ntBASIC14.35□□□□□ -0.11
CPNE3O75131 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE3O75131 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPNE3O75131 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE3O75131 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CPNE3O75131 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CPNE3O75131 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE3O75131 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE3O75131 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CPNE3O75131 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CPNE3O75131 BCYRN1-201ENST00000418539 200 ntBASIC14.34□□□□□ -0.11
CPNE3O75131 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE3O75131 FTLP10-202ENST00000505798 471 ntBASIC14.34□□□□□ -0.11
CPNE3O75131 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE3O75131 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 DUX4L47-201ENST00000566374 394 ntBASIC14.34□□□□□ -0.11
CPNE3O75131 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms