Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.18□□□□□ -0.46
SSSCA1O60232 MED15P5-201ENST00000423150 992 ntBASIC12.18□□□□□ -0.46
SSSCA1O60232 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.18□□□□□ -0.46
SSSCA1O60232 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.18□□□□□ -0.46
SSSCA1O60232 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.18□□□□□ -0.46
SSSCA1O60232 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.18□□□□□ -0.46
SSSCA1O60232 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.18□□□□□ -0.46
SSSCA1O60232 LINC00628-201ENST00000628516 1289 ntBASIC12.18□□□□□ -0.46
SSSCA1O60232 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.18□□□□□ -0.46
SSSCA1O60232 AC020910.6-201ENST00000623084 1459 ntBASIC12.18□□□□□ -0.46
SSSCA1O60232 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SSSCA1O60232 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.18□□□□□ -0.46
SSSCA1O60232 AL137783.1-201ENST00000623494 1896 ntBASIC12.18□□□□□ -0.46
SSSCA1O60232 AC073548.1-201ENST00000624088 1882 ntBASIC12.18□□□□□ -0.46
SSSCA1O60232 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.18□□□□□ -0.46
SSSCA1O60232 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SSSCA1O60232 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SSSCA1O60232 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SSSCA1O60232 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.17□□□□□ -0.46
SSSCA1O60232 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 AC015818.8-201ENST00000587907 1519 ntBASIC12.17□□□□□ -0.46
SSSCA1O60232 AC111170.3-201ENST00000624282 2464 ntBASIC12.17□□□□□ -0.46
SSSCA1O60232 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SSSCA1O60232 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.17□□□□□ -0.46
SSSCA1O60232 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 AC019294.4-201ENST00000561777 2905 ntBASIC12.17□□□□□ -0.46
SSSCA1O60232 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SSSCA1O60232 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.17□□□□□ -0.46
SSSCA1O60232 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.17□□□□□ -0.46
SSSCA1O60232 AC004066.1-201ENST00000502488 802 ntBASIC12.17□□□□□ -0.46
SSSCA1O60232 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.17□□□□□ -0.46
SSSCA1O60232 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.17□□□□□ -0.46
SSSCA1O60232 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.17□□□□□ -0.46
SSSCA1O60232 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.17□□□□□ -0.46
SSSCA1O60232 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.17□□□□□ -0.46
SSSCA1O60232 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.17□□□□□ -0.46
SSSCA1O60232 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.17□□□□□ -0.46
SSSCA1O60232 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms