Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC025181.2-201ENST00000606994 802 ntBASIC14.22□□□□□ -0.13
CLOCKO15516 AC073592.8-201ENST00000624126 511 ntBASIC14.22□□□□□ -0.13
CLOCKO15516 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLOCKO15516 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.22□□□□□ -0.13
CLOCKO15516 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.22□□□□□ -0.13
CLOCKO15516 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.22□□□□□ -0.13
CLOCKO15516 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLOCKO15516 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CLOCKO15516 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.21□□□□□ -0.13
CLOCKO15516 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
CLOCKO15516 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CLOCKO15516 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.21□□□□□ -0.13
CLOCKO15516 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.21□□□□□ -0.13
CLOCKO15516 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.21□□□□□ -0.13
CLOCKO15516 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.21□□□□□ -0.13
CLOCKO15516 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLOCKO15516 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CLOCKO15516 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 AC241585.1-201ENST00000433527 519 ntBASIC14.21□□□□□ -0.13
CLOCKO15516 MTND6P24-201ENST00000440466 518 ntBASIC14.21□□□□□ -0.13
CLOCKO15516 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.21□□□□□ -0.13
CLOCKO15516 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.21□□□□□ -0.13
CLOCKO15516 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.21□□□□□ -0.13
CLOCKO15516 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.21□□□□□ -0.13
CLOCKO15516 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.21□□□□□ -0.13
CLOCKO15516 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.21□□□□□ -0.13
CLOCKO15516 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLOCKO15516 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.21□□□□□ -0.13
CLOCKO15516 AC016397.2-201ENST00000624848 1985 ntBASIC14.21□□□□□ -0.13
CLOCKO15516 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLOCKO15516 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLOCKO15516 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLOCKO15516 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.21□□□□□ -0.14
CLOCKO15516 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLOCKO15516 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CLOCKO15516 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLOCKO15516 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.21□□□□□ -0.14
CLOCKO15516 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CLOCKO15516 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CLOCKO15516 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLOCKO15516 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.2□□□□□ -0.14
CLOCKO15516 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.2□□□□□ -0.14
CLOCKO15516 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLOCKO15516 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.2□□□□□ -0.14
CLOCKO15516 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.2□□□□□ -0.14
CLOCKO15516 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLOCKO15516 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.2□□□□□ -0.14
CLOCKO15516 SPDYE17-201ENST00000412399 783 ntBASIC14.2□□□□□ -0.14
CLOCKO15516 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.2□□□□□ -0.14
CLOCKO15516 UGT1A2P-201ENST00000454886 866 ntBASIC14.2□□□□□ -0.14
CLOCKO15516 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms