Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
XIRP2A4UGR9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.04■□□□□ -0
XIRP2A4UGR9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
XIRP2A4UGR9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
XIRP2A4UGR9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.04■□□□□ -0
XIRP2A4UGR9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.04■□□□□ -0
XIRP2A4UGR9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
XIRP2A4UGR9 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
XIRP2A4UGR9 SNORA57-201ENST00000383870 149 ntBASIC15.04■□□□□ -0
XIRP2A4UGR9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.04■□□□□ -0
XIRP2A4UGR9 RHOQP2-201ENST00000449922 579 ntBASIC15.04■□□□□ -0
XIRP2A4UGR9 RN7SL578P-201ENST00000477781 283 ntBASIC15.04■□□□□ -0
XIRP2A4UGR9 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC15.04■□□□□ -0
XIRP2A4UGR9 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
XIRP2A4UGR9 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.04■□□□□ -0
XIRP2A4UGR9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.04■□□□□ -0
XIRP2A4UGR9 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC15.04■□□□□ -0
XIRP2A4UGR9 AC005865.2-202ENST00000635814 725 ntBASIC15.04■□□□□ -0
XIRP2A4UGR9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.04■□□□□ -0
XIRP2A4UGR9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
XIRP2A4UGR9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.04■□□□□ -0
XIRP2A4UGR9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.03■□□□□ -0
XIRP2A4UGR9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.03■□□□□ -0
XIRP2A4UGR9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.03■□□□□ -0
XIRP2A4UGR9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
XIRP2A4UGR9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.03■□□□□ -0
XIRP2A4UGR9 OLA1P2-201ENST00000395519 1264 ntBASIC15.03■□□□□ -0
XIRP2A4UGR9 PPP1R2P4-201ENST00000424051 595 ntBASIC15.03■□□□□ -0
XIRP2A4UGR9 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.03■□□□□ -0
XIRP2A4UGR9 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC15.03■□□□□ -0
XIRP2A4UGR9 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.03■□□□□ -0
XIRP2A4UGR9 SEPHS2P1-201ENST00000511618 1162 ntBASIC15.03■□□□□ -0
XIRP2A4UGR9 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 KRT8P1-201ENST00000557533 1207 ntBASIC15.03■□□□□ -0
XIRP2A4UGR9 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.03■□□□□ -0
XIRP2A4UGR9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.03■□□□□ -0
XIRP2A4UGR9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.03■□□□□ -0
XIRP2A4UGR9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.03■□□□□ -0
XIRP2A4UGR9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.03■□□□□ -0
XIRP2A4UGR9 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 BX088651.3-201ENST00000418155 352 ntBASIC15.03■□□□□ -0
XIRP2A4UGR9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
XIRP2A4UGR9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.03■□□□□ -0
XIRP2A4UGR9 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC15.03■□□□□ -0
XIRP2A4UGR9 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.03■□□□□ -0
XIRP2A4UGR9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
XIRP2A4UGR9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.03■□□□□ -0
XIRP2A4UGR9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.03■□□□□ -0
XIRP2A4UGR9 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
XIRP2A4UGR9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.03■□□□□ -0
XIRP2A4UGR9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.02■□□□□ -0
XIRP2A4UGR9 KRT8P30-201ENST00000432100 650 ntBASIC15.02■□□□□ -0
XIRP2A4UGR9 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.02■□□□□ -0
XIRP2A4UGR9 AC027612.2-202ENST00000445955 1199 ntBASIC15.02■□□□□ -0
XIRP2A4UGR9 AL035414.1-201ENST00000451327 857 ntBASIC15.02■□□□□ -0
XIRP2A4UGR9 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC15.02■□□□□ -0
XIRP2A4UGR9 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.02■□□□□ -0
XIRP2A4UGR9 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC15.02■□□□□ -0
XIRP2A4UGR9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.02■□□□□ -0
XIRP2A4UGR9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.02■□□□□ -0
XIRP2A4UGR9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.02■□□□□ -0
XIRP2A4UGR9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
XIRP2A4UGR9 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.02■□□□□ -0
XIRP2A4UGR9 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
XIRP2A4UGR9 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.02■□□□□ -0
XIRP2A4UGR9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
XIRP2A4UGR9 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
XIRP2A4UGR9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.02■□□□□ -0
XIRP2A4UGR9 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
XIRP2A4UGR9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.02■□□□□ -0
XIRP2A4UGR9 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.02■□□□□ -0
XIRP2A4UGR9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
XIRP2A4UGR9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
XIRP2A4UGR9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
XIRP2A4UGR9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.02□□□□□ -0.01
XIRP2A4UGR9 ANKRD26P1-203ENST00000569528 966 ntBASIC15.02□□□□□ -0.01
XIRP2A4UGR9 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms