Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 AC010336.2-201ENST00000564226 506 ntBASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 AC003102.2-201ENST00000589195 1469 ntBASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV3S1A0A5B6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TCRBV3S1A0A5B6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
TCRBV3S1A0A5B6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 AL138799.1-201ENST00000448213 1675 ntBASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 MIR1224-201ENST00000408193 85 ntBASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 AC051619.7-201ENST00000568314 623 ntBASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 PRSS30P-206ENST00000641773 873 ntBASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 DRD5P1-201ENST00000456605 1438 ntBASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TCRBV3S1A0A5B6 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TCRBV3S1A0A5B6 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms