Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 AP001065.2-201ENST00000617205 644 ntBASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC187A0A096LP49 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 KRT18P9-201ENST00000604826 1300 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AC114501.1-201ENST00000445949 172 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AP000358.1-201ENST00000456260 156 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AC023824.1-201ENST00000562945 2975 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 DNM1P30-201ENST00000563586 452 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 PHBP15-201ENST00000574228 665 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AC138894.2-201ENST00000602838 371 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AC005632.3-201ENST00000605544 308 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 MEG3_2.1-201ENST00000611456 105 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 YRDCP1-201ENST00000621419 643 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AC023090.2-201ENST00000625182 2110 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC187A0A096LP49 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 CYP4F23P-201ENST00000593402 1579 ntBASIC14□□□□□ -0.17
CCDC187A0A096LP49 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14□□□□□ -0.17
CCDC187A0A096LP49 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms