Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 PCSK1-202ENST00000508626 2234 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AK1-201ENST00000223836 736 ntTSL 3 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AP003041.3-201ENST00000527151 707 ntBASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AC087641.1-201ENST00000557561 1021 ntBASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 MIR4321-201ENST00000592276 80 ntBASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AL136967.2-201ENST00000623968 743 ntBASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AC104758.3-203ENST00000562938 2123 ntBASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LINC01558Q9Y6Z2 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 DQX1-201ENST00000393951 2540 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC7.57□□□□□ -1.2
LINC01558Q9Y6Z2 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms