Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 HLA-DPA2-205ENST00000433582 733 ntBASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 RN7SL277P-201ENST00000481521 288 ntBASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 RN7SL23P-201ENST00000484055 275 ntBASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 RN7SL582P-201ENST00000491078 279 ntBASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 AC083801.1-201ENST00000491689 358 ntBASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 RNA5SP406-201ENST00000516106 112 ntBASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 PTPN20CP-201ENST00000614090 920 ntBASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCH2Q9Y6C5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 AC023141.7-201ENST00000430646 407 ntBASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 KRT18P46-201ENST00000435568 1279 ntBASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 GOLGA2P7-209ENST00000560408 745 ntBASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 AC006483.2-201ENST00000609813 515 ntBASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 AC023090.2-201ENST00000625182 2110 ntBASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 LILRP1-201ENST00000444199 1370 ntBASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 CICP13-201ENST00000422015 2789 ntBASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCH2Q9Y6C5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 PRAL-201ENST00000624952 3286 ntBASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 MIR645-201ENST00000385283 94 ntBASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCH2Q9Y6C5 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms