Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 AC004066.1-201ENST00000502488 802 ntBASIC14.1□□□□□ -0.15
AP4S1Q9Y587 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 MYADML-201ENST00000474610 2147 ntBASIC14.09□□□□□ -0.15
AP4S1Q9Y587 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 AC004899.2-201ENST00000622993 3860 ntBASIC14.09□□□□□ -0.15
AP4S1Q9Y587 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 AC007967.2-201ENST00000432613 625 ntBASIC14.09□□□□□ -0.15
AP4S1Q9Y587 ADH5P3-201ENST00000433842 1137 ntBASIC14.09□□□□□ -0.15
AP4S1Q9Y587 AC079781.3-201ENST00000449110 356 ntBASIC14.09□□□□□ -0.15
AP4S1Q9Y587 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 KRT8P48-201ENST00000515599 1220 ntBASIC14.09□□□□□ -0.15
AP4S1Q9Y587 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 AC034105.1-201ENST00000563488 319 ntBASIC14.09□□□□□ -0.15
AP4S1Q9Y587 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 AF228730.6-201ENST00000641497 218 ntBASIC14.09□□□□□ -0.15
AP4S1Q9Y587 AC084121.3-201ENST00000641716 218 ntBASIC14.09□□□□□ -0.15
AP4S1Q9Y587 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP4S1Q9Y587 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 AC215219.1-201ENST00000400706 1817 ntBASIC14.08□□□□□ -0.15
AP4S1Q9Y587 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms