Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FNDC3AQ9Y2H6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 WASH3P-207ENST00000560956 1394 ntBASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 CALR4P-201ENST00000431943 946 ntBASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 IGHJ2P-201ENST00000454480 60 ntBASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 AL021578.1-201ENST00000613646 709 ntBASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 AC005695.3-201ENST00000614522 232 ntBASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.27■□□□□ 0.04
FNDC3AQ9Y2H6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 AL513477.1-201ENST00000602865 2407 ntBASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 AC106881.1-201ENST00000605849 3329 ntBASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
FNDC3AQ9Y2H6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 BTBD6P1-201ENST00000412176 1267 ntBASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 SLC25A24P2-201ENST00000415059 510 ntBASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 AL590640.2-201ENST00000457038 527 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms