Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 REXO1L4P-201ENST00000605109 1937 ntBASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 AP000845.1-201ENST00000581677 2131 ntBASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA1Q9UND3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 EIF3FP3-201ENST00000434851 1086 ntBASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 OR10B1P-201ENST00000601666 907 ntBASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 AL023775.1-201ENST00000454907 1746 ntBASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms