Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLIP2Q9UDT6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 AC104306.2-201ENST00000451877 341 ntBASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLIP2Q9UDT6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.64■□□□□ 0.42
CLIP2Q9UDT6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CLIP2Q9UDT6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLIP2Q9UDT6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CLIP2Q9UDT6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CLIP2Q9UDT6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 AC104982.3-201ENST00000581995 514 ntBASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 AC243960.2-201ENST00000600996 747 ntBASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 AL096828.3-201ENST00000615354 462 ntBASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 MIR6787-201ENST00000616675 61 ntBASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 INE2-201ENST00000630399 1874 ntBASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms