Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT1Q9P2V4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT1Q9P2V4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT1Q9P2V4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LRIT1Q9P2V4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT1Q9P2V4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT1Q9P2V4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRIT1Q9P2V4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 FAM90A7P-201ENST00000382628 1395 ntBASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 FAM90A23P-201ENST00000400136 1395 ntBASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.31□□□□□ -0.12
LRIT1Q9P2V4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 AL157407.1-201ENST00000435784 904 ntBASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRIT1Q9P2V4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms