Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.07□□□□□ -0.16
VAPAQ9P0L0 TLE1P1-201ENST00000422965 589 ntBASIC14.07□□□□□ -0.16
VAPAQ9P0L0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 DOC2GP-202ENST00000514950 1163 ntBASIC14.07□□□□□ -0.16
VAPAQ9P0L0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.07□□□□□ -0.16
VAPAQ9P0L0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VAPAQ9P0L0 HSPA8P5-201ENST00000456928 2069 ntBASIC14.06□□□□□ -0.16
VAPAQ9P0L0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 AC114812.1-204ENST00000449669 728 ntBASIC14.06□□□□□ -0.16
VAPAQ9P0L0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 AP001582.1-201ENST00000525856 295 ntBASIC14.06□□□□□ -0.16
VAPAQ9P0L0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 MIR8072-201ENST00000614241 80 ntBASIC14.06□□□□□ -0.16
VAPAQ9P0L0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 AL603764.1-201ENST00000636452 321 ntBASIC14.06□□□□□ -0.16
VAPAQ9P0L0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VAPAQ9P0L0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms