Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 GNAQP1-201ENST00000444815 1067 ntBASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 AC104596.2-201ENST00000512793 793 ntBASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIN7CQ9NUP9 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 AC027307.3-201ENST00000594262 1100 ntBASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 AC093726.1-201ENST00000608064 963 ntBASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 AL391069.4-201ENST00000609583 481 ntBASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 AC004790.1-201ENST00000612686 536 ntBASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIN7CQ9NUP9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms