Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 MIR6805-201ENST00000615055 62 ntBASIC12.77□□□□□ -0.37
GCM1Q9NP62 MIR6775-201ENST00000617557 69 ntBASIC12.77□□□□□ -0.37
GCM1Q9NP62 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GCM1Q9NP62 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
GCM1Q9NP62 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 FAM197Y7-201ENST00000432892 766 ntBASIC12.76□□□□□ -0.37
GCM1Q9NP62 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 SNX29P1-201ENST00000548357 1007 ntBASIC12.76□□□□□ -0.37
GCM1Q9NP62 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 AP005482.1-201ENST00000563722 1273 ntBASIC12.76□□□□□ -0.37
GCM1Q9NP62 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 AC138951.2-201ENST00000623455 1161 ntBASIC12.76□□□□□ -0.37
GCM1Q9NP62 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 LINC00528-201ENST00000600723 2160 ntBASIC12.76□□□□□ -0.37
GCM1Q9NP62 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.76□□□□□ -0.37
GCM1Q9NP62 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GCM1Q9NP62 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms