Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.07□□□□□ -0.32
CDH20Q9HBT6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 AC112492.5-201ENST00000421897 457 ntBASIC13.06□□□□□ -0.32
CDH20Q9HBT6 U91328.1-201ENST00000437528 223 ntBASIC13.06□□□□□ -0.32
CDH20Q9HBT6 KLF2P4-201ENST00000451959 1225 ntBASIC13.06□□□□□ -0.32
CDH20Q9HBT6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 RNA5SP486-201ENST00000515961 83 ntBASIC13.06□□□□□ -0.32
CDH20Q9HBT6 KRT90P-201ENST00000549264 1064 ntBASIC13.06□□□□□ -0.32
CDH20Q9HBT6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 GNRHR2-203ENST00000581100 1187 ntBASIC13.06□□□□□ -0.32
CDH20Q9HBT6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 AC244669.2-201ENST00000612320 853 ntBASIC13.06□□□□□ -0.32
CDH20Q9HBT6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 AC138951.2-201ENST00000623455 1161 ntBASIC13.06□□□□□ -0.32
CDH20Q9HBT6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 AL137784.3-201ENST00000623858 2288 ntBASIC13.06□□□□□ -0.32
CDH20Q9HBT6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDH20Q9HBT6 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AL354989.2-201ENST00000435838 1540 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 PDIA3P1-201ENST00000471856 1510 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AC007292.2-201ENST00000593524 1812 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 FAM197Y7-201ENST00000432892 766 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AC007969.1-201ENST00000433675 447 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AL590640.2-201ENST00000457038 527 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms