Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.52□□□□□ -0.09
EBF4Q9BQW3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
EBF4Q9BQW3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 DRD5P1-201ENST00000456605 1438 ntBASIC14.51□□□□□ -0.09
EBF4Q9BQW3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 MIR574-201ENST00000385209 96 ntBASIC14.51□□□□□ -0.09
EBF4Q9BQW3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 KRT18P58-201ENST00000527480 1120 ntBASIC14.51□□□□□ -0.09
EBF4Q9BQW3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 AL365181.3-201ENST00000605886 3222 ntBASIC14.51□□□□□ -0.09
EBF4Q9BQW3 AC072061.1-201ENST00000569710 2234 ntBASIC14.51□□□□□ -0.09
EBF4Q9BQW3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 AL138799.1-201ENST00000448213 1675 ntBASIC14.51□□□□□ -0.09
EBF4Q9BQW3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EBF4Q9BQW3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 AL591122.2-201ENST00000624125 1853 ntBASIC14.5□□□□□ -0.09
EBF4Q9BQW3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 AC126335.2-201ENST00000623362 4637 ntBASIC14.5□□□□□ -0.09
EBF4Q9BQW3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 AC092364.2-202ENST00000597012 1073 ntBASIC14.5□□□□□ -0.09
EBF4Q9BQW3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms