Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 TOMM22P5-201ENST00000416399 439 ntBASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 AC004945.1-201ENST00000416738 983 ntBASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 AC011495.1-201ENST00000498085 584 ntBASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 TMEM261P1-201ENST00000604899 340 ntBASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1CQ9BQE3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 AC132938.2-201ENST00000579188 680 ntBASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 IGHV3-72-202ENST00000621503 303 ntBASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 AL591163.1-201ENST00000641757 987 ntBASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1CQ9BQE3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms