Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 AC005225.4-201ENST00000557330 545 ntBASIC13.65□□□□□ -0.22
SNX18Q96RF0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 AC027307.3-201ENST00000594262 1100 ntBASIC13.65□□□□□ -0.22
SNX18Q96RF0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNX18Q96RF0 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.65□□□□□ -0.22
SNX18Q96RF0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SNX18Q96RF0 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
SNX18Q96RF0 AC093525.8-201ENST00000624099 1342 ntBASIC13.64□□□□□ -0.23
SNX18Q96RF0 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 CRB3P1-201ENST00000449338 276 ntBASIC13.64□□□□□ -0.23
SNX18Q96RF0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 AC152010.1-201ENST00000415779 2006 ntBASIC13.64□□□□□ -0.23
SNX18Q96RF0 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SNX18Q96RF0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 AC063926.2-201ENST00000623766 1308 ntBASIC13.64□□□□□ -0.23
SNX18Q96RF0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNX18Q96RF0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 PIN1P1-201ENST00000412108 996 ntBASIC13.63□□□□□ -0.23
SNX18Q96RF0 AC244107.1-201ENST00000442033 332 ntBASIC13.63□□□□□ -0.23
SNX18Q96RF0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 414.1 ms