Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 AC074386.1-202ENST00000463561 864 ntBASIC11.34□□□□□ -0.59
AP1S3Q96PC3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 IGHV3-22-201ENST00000520721 359 ntBASIC11.34□□□□□ -0.59
AP1S3Q96PC3 AP001005.1-201ENST00000571755 1248 ntBASIC11.34□□□□□ -0.59
AP1S3Q96PC3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 AC027307.2-201ENST00000591252 911 ntBASIC11.34□□□□□ -0.59
AP1S3Q96PC3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 PCDHA9-201ENST00000378122 6900 ntBASIC11.34□□□□□ -0.59
AP1S3Q96PC3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AP1S3Q96PC3 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 AC084364.1-201ENST00000551967 1556 ntBASIC11.33□□□□□ -0.6
AP1S3Q96PC3 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 MIR1224-201ENST00000408193 85 ntBASIC11.33□□□□□ -0.6
AP1S3Q96PC3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 AC136604.1-201ENST00000418535 575 ntBASIC11.33□□□□□ -0.6
AP1S3Q96PC3 AC142381.1-201ENST00000426099 345 ntBASIC11.33□□□□□ -0.6
AP1S3Q96PC3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 AC079781.3-201ENST00000449110 356 ntBASIC11.33□□□□□ -0.6
AP1S3Q96PC3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AP1S3Q96PC3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms