Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 IGHV3-72-202ENST00000621503 303 ntBASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDLIM5Q96HC4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 TCAM1P-207ENST00000485295 1537 ntBASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 RN7SL713P-201ENST00000582127 302 ntBASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 AC002472.3-201ENST00000640124 621 ntBASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.47□□□□□ -0.09
PDLIM5Q96HC4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 AL136309.1-201ENST00000403917 691 ntBASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 TMEM14DP-201ENST00000422205 345 ntBASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 AL035414.1-201ENST00000451327 857 ntBASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 AC078819.1-201ENST00000547454 765 ntBASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 AC012085.1-201ENST00000548270 765 ntBASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 KRT90P-201ENST00000549264 1064 ntBASIC14.46□□□□□ -0.09
PDLIM5Q96HC4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 653.6 ms