Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CPNE2Q96FN4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 DNAJB3-202ENST00000449667 1266 ntBASIC13.02□□□□□ -0.33
CPNE2Q96FN4 IGHV3-42-201ENST00000520410 361 ntBASIC13.02□□□□□ -0.33
CPNE2Q96FN4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 AL844908.2-201ENST00000609461 460 ntBASIC13.02□□□□□ -0.33
CPNE2Q96FN4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 AC100757.3-201ENST00000622361 1406 ntBASIC13.02□□□□□ -0.33
CPNE2Q96FN4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 DGCR9-201ENST00000609630 2415 ntBASIC13.02□□□□□ -0.33
CPNE2Q96FN4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.02□□□□□ -0.33
CPNE2Q96FN4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
CPNE2Q96FN4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms