Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 HSPA8P5-201ENST00000456928 2069 ntBASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 AC015688.4-201ENST00000580780 1647 ntBASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC44A1Q8WWI5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 KLF2P2-201ENST00000416807 1039 ntBASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 AC134915.1-201ENST00000426461 574 ntBASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 CYMP-203ENST00000474680 1263 ntBASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 AC090643.2-201ENST00000623442 2029 ntBASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 AL138725.1-201ENST00000407347 1314 ntBASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC44A1Q8WWI5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 DOC2GP-202ENST00000514950 1163 ntBASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 AP001582.1-201ENST00000525856 295 ntBASIC14.9□□□□□ -0.02
SLC44A1Q8WWI5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms