Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARHGEF40Q8TER5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARHGEF40Q8TER5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARHGEF40Q8TER5 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 SNRPD2P2-201ENST00000473818 333 ntBASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 AC090820.1-201ENST00000519722 591 ntBASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 EEF1DP7-201ENST00000580496 513 ntBASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 RN7SL524P-201ENST00000581152 300 ntBASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 NALT1-202ENST00000450304 437 ntTSL 3 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 RN7SL578P-201ENST00000477781 283 ntBASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 RN7SL523P-201ENST00000484401 298 ntBASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ARHGEF40Q8TER5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 FAM226B-201ENST00000602508 1490 ntBASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 AC026412.1-206ENST00000502273 206 ntBASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 NF1P11-201ENST00000621292 1282 ntBASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC21.18■□□□□ 0.98
ARHGEF40Q8TER5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 AC126365.1-201ENST00000578585 1514 ntBASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 B9D1-206ENST00000461069 923 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 AC112693.3-201ENST00000624819 1983 ntBASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF40Q8TER5 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ARHGEF40Q8TER5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF40Q8TER5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF40Q8TER5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms