Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 AC015688.4-201ENST00000580780 1647 ntBASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 C2orf27AP3-201ENST00000434123 579 ntBASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 KRT223P-202ENST00000449164 1292 ntBASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 AC103988.2-201ENST00000561804 725 ntBASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 AC133552.6-201ENST00000613406 534 ntBASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 AL354718.3-201ENST00000616414 581 ntBASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 MIR6775-201ENST00000617557 69 ntBASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 CR382287.1-201ENST00000623954 586 ntBASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDH19Q8TAB3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 FLJ16779-201ENST00000612722 7638 ntBASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 AC006504.5-208ENST00000588784 2401 ntBASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 ANKRD19P-201ENST00000338192 862 ntBASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 AC016694.1-201ENST00000434179 700 ntBASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 AC078819.1-201ENST00000547454 765 ntBASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 AC012085.1-201ENST00000548270 765 ntBASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 AP005482.1-201ENST00000563722 1273 ntBASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 COX11-210ENST00000639671 696 ntBASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 AC012617.1-204ENST00000586340 2305 ntBASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms