Protein–RNA interactions for Protein: Q8ND07

BBOF1, Basal body-orientation factor 1, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBOF1Q8ND07 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 SALL4P5-201ENST00000419001 1760 ntBASIC15.32■□□□□ 0.04
BBOF1Q8ND07 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 AC092580.3-201ENST00000430932 139 ntBASIC15.32■□□□□ 0.04
BBOF1Q8ND07 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 SRD5A3P1-201ENST00000603021 949 ntBASIC15.32■□□□□ 0.04
BBOF1Q8ND07 AC139530.3-201ENST00000620344 690 ntBASIC15.32■□□□□ 0.04
BBOF1Q8ND07 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 AL136172.1-201ENST00000598590 1394 ntBASIC15.32■□□□□ 0.04
BBOF1Q8ND07 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBOF1Q8ND07 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 AL137784.3-201ENST00000623858 2288 ntBASIC15.31■□□□□ 0.04
BBOF1Q8ND07 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 AC114812.1-204ENST00000449669 728 ntBASIC15.31■□□□□ 0.04
BBOF1Q8ND07 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 AC097493.3-201ENST00000509725 367 ntBASIC15.31■□□□□ 0.04
BBOF1Q8ND07 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBOF1Q8ND07 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms