Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 GRK6P1-201ENST00000400595 1711 ntBASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 AC006033.1-201ENST00000440505 426 ntBASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 AL139099.5-201ENST00000635274 300 ntBASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 AC097359.2-201ENST00000604992 2389 ntBASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC33Q8N5R6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 BTBD6P1-201ENST00000412176 1267 ntBASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 AC007969.1-201ENST00000433675 447 ntBASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 KRT8P13-201ENST00000463294 1010 ntBASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 RNA5SP486-201ENST00000515961 83 ntBASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC33Q8N5R6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms