Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.26■□□□□ 0.03
SIX5Q8N196 AC005962.1-201ENST00000584100 773 ntBASIC15.26■□□□□ 0.03
SIX5Q8N196 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 AC127024.7-201ENST00000625101 200 ntBASIC15.26■□□□□ 0.03
SIX5Q8N196 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SIX5Q8N196 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX5Q8N196 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX5Q8N196 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX5Q8N196 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SIX5Q8N196 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SIX5Q8N196 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIX5Q8N196 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.26■□□□□ 0.03
SIX5Q8N196 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 AL596087.1-201ENST00000400979 1969 ntBASIC15.25■□□□□ 0.03
SIX5Q8N196 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC136759.1-202ENST00000530858 2194 ntBASIC15.25■□□□□ 0.03
SIX5Q8N196 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX5Q8N196 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.25■□□□□ 0.03
SIX5Q8N196 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.25■□□□□ 0.03
SIX5Q8N196 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.25■□□□□ 0.03
SIX5Q8N196 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC078875.1-201ENST00000431907 724 ntBASIC15.25■□□□□ 0.03
SIX5Q8N196 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SIX5Q8N196 MIR3677-201ENST00000578964 60 ntBASIC15.25■□□□□ 0.03
SIX5Q8N196 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC009884.2-201ENST00000603110 324 ntBASIC15.25■□□□□ 0.03
SIX5Q8N196 AC138696.2-201ENST00000607376 223 ntBASIC15.25■□□□□ 0.03
SIX5Q8N196 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC011840.2-201ENST00000563063 1520 ntBASIC15.25■□□□□ 0.03
SIX5Q8N196 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SIX5Q8N196 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SIX5Q8N196 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX5Q8N196 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX5Q8N196 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX5Q8N196 AL157414.3-201ENST00000624276 1954 ntBASIC15.25■□□□□ 0.03
SIX5Q8N196 AC069224.1-201ENST00000566372 1715 ntBASIC15.25■□□□□ 0.03
SIX5Q8N196 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX5Q8N196 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX5Q8N196 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 SBF1P1-201ENST00000444527 5631 ntBASIC15.25■□□□□ 0.03
SIX5Q8N196 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.25■□□□□ 0.03
SIX5Q8N196 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SIX5Q8N196 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX5Q8N196 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.24■□□□□ 0.03
SIX5Q8N196 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.24■□□□□ 0.03
SIX5Q8N196 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX5Q8N196 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.24■□□□□ 0.03
SIX5Q8N196 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms