Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 AC091544.8-201ENST00000619490 361 ntBASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 AL805961.1-203ENST00000641078 1258 ntBASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 AC138627.1-207ENST00000641560 1006 ntBASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC60Q8IWA6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 MTHFR-210ENST00000641407 2387 ntBASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 MIR769-201ENST00000390225 118 ntBASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 RN7SL11P-201ENST00000471305 293 ntBASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 RCC2P8-201ENST00000502779 1035 ntBASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 MIR3619-201ENST00000579667 83 ntBASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 AP001505.2-201ENST00000616815 443 ntBASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 FLJ16779-201ENST00000612722 7638 ntBASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC60Q8IWA6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 AC008132.1-202ENST00000342005 1389 ntBASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC60Q8IWA6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms