Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNGA4Q8IV77 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.19■□□□□ 0.18
CNGA4Q8IV77 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNGA4Q8IV77 AC023794.5-201ENST00000564380 2157 ntBASIC16.19■□□□□ 0.18
CNGA4Q8IV77 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNGA4Q8IV77 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 AC026434.2-201ENST00000506094 1078 ntBASIC16.18■□□□□ 0.18
CNGA4Q8IV77 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 KRT8P35-201ENST00000483942 1338 ntBASIC16.18■□□□□ 0.18
CNGA4Q8IV77 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CNGA4Q8IV77 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.17■□□□□ 0.18
CNGA4Q8IV77 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 TSEN15P1-201ENST00000423257 515 ntBASIC16.17■□□□□ 0.18
CNGA4Q8IV77 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 AC009477.1-201ENST00000452936 217 ntBASIC16.17■□□□□ 0.18
CNGA4Q8IV77 AL589987.1-201ENST00000453380 819 ntBASIC16.17■□□□□ 0.18
CNGA4Q8IV77 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 VDAC1P7-201ENST00000462417 847 ntBASIC16.17■□□□□ 0.18
CNGA4Q8IV77 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 RARRES2P5-201ENST00000564013 466 ntBASIC16.17■□□□□ 0.18
CNGA4Q8IV77 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 SRD5A3P1-201ENST00000603021 949 ntBASIC16.17■□□□□ 0.18
CNGA4Q8IV77 AL662799.1-202ENST00000614205 422 ntBASIC16.17■□□□□ 0.18
CNGA4Q8IV77 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 AL590560.3-201ENST00000623350 461 ntBASIC16.17■□□□□ 0.18
CNGA4Q8IV77 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.17■□□□□ 0.18
CNGA4Q8IV77 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms