Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 MIR6869-201ENST00000619434 62 ntBASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 AC097376.2-205ENST00000610159 5334 ntBASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM4Q86VH4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 AC104306.2-201ENST00000451877 341 ntBASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 AC100827.2-201ENST00000563214 1194 ntBASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 DUX4L46-201ENST00000566845 751 ntBASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 E2F3P2-201ENST00000447755 1422 ntBASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM4Q86VH4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 AL035414.1-201ENST00000451327 857 ntBASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 AC009955.4-201ENST00000597192 544 ntBASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 AL118558.3-201ENST00000607414 1079 ntBASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRTM4Q86VH4 AC027601.3-201ENST00000622907 509 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms