Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.24■□□□□ 0.03
CASC4Q6P4E1 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 AL139094.1-201ENST00000405549 1188 ntBASIC15.24■□□□□ 0.03
CASC4Q6P4E1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 AC022447.6-201ENST00000515522 438 ntBASIC15.24■□□□□ 0.03
CASC4Q6P4E1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 MIR8072-201ENST00000614241 80 ntBASIC15.24■□□□□ 0.03
CASC4Q6P4E1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 AC055811.4-201ENST00000624039 1754 ntBASIC15.24■□□□□ 0.03
CASC4Q6P4E1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CASC4Q6P4E1 SLC7A15P-201ENST00000424028 1363 ntBASIC15.24■□□□□ 0.03
CASC4Q6P4E1 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 SOCS2P1-201ENST00000417727 557 ntBASIC15.23■□□□□ 0.03
CASC4Q6P4E1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 AC009118.2-201ENST00000613275 655 ntBASIC15.23■□□□□ 0.03
CASC4Q6P4E1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 AL354702.1-201ENST00000442006 1960 ntBASIC15.23■□□□□ 0.03
CASC4Q6P4E1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 AC015802.1-201ENST00000588104 1449 ntBASIC15.23■□□□□ 0.03
CASC4Q6P4E1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CASC4Q6P4E1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASC4Q6P4E1 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms