Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 RNA5SP486-201ENST00000515961 83 ntBASIC15.65■□□□□ 0.1
RNF43Q68DV7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 AC078819.1-201ENST00000547454 765 ntBASIC15.65■□□□□ 0.1
RNF43Q68DV7 AC012085.1-201ENST00000548270 765 ntBASIC15.65■□□□□ 0.1
RNF43Q68DV7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 AL360270.3-201ENST00000609118 1348 ntBASIC15.65■□□□□ 0.1
RNF43Q68DV7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 AC015656.1-201ENST00000624209 3578 ntBASIC15.64■□□□□ 0.09
RNF43Q68DV7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 MIR6727-201ENST00000620702 65 ntBASIC15.64■□□□□ 0.09
RNF43Q68DV7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.64■□□□□ 0.09
RNF43Q68DV7 AC006453.4-201ENST00000636949 1252 ntBASIC15.64■□□□□ 0.09
RNF43Q68DV7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF43Q68DV7 AL928921.2-201ENST00000641325 2442 ntBASIC15.64■□□□□ 0.09
RNF43Q68DV7 C8orf49-201ENST00000525043 1968 ntBASIC15.64■□□□□ 0.09
RNF43Q68DV7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RNF43Q68DV7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms