Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AL133338.1-201ENST00000565695 1517 ntBASIC20.36■□□□□ 0.85
CDCA8Q53HL2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 AC006504.5-208ENST00000588784 2401 ntBASIC20.36■□□□□ 0.85
CDCA8Q53HL2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 MTHFR-210ENST00000641407 2387 ntBASIC20.36■□□□□ 0.85
CDCA8Q53HL2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC20.36■□□□□ 0.85
CDCA8Q53HL2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC20.36■□□□□ 0.85
CDCA8Q53HL2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 AC011742.3-201ENST00000439053 820 ntBASIC20.35■□□□□ 0.85
CDCA8Q53HL2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 TPT1P11-201ENST00000458482 498 ntBASIC20.35■□□□□ 0.85
CDCA8Q53HL2 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 SCARNA21-201ENST00000517026 139 ntBASIC20.35■□□□□ 0.85
CDCA8Q53HL2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 AC027237.1-201ENST00000560942 655 ntBASIC20.35■□□□□ 0.85
CDCA8Q53HL2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 MYADML-201ENST00000474610 2147 ntBASIC20.35■□□□□ 0.85
CDCA8Q53HL2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDCA8Q53HL2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 FNTAP2-201ENST00000430308 634 ntBASIC20.34■□□□□ 0.85
CDCA8Q53HL2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC20.34■□□□□ 0.85
CDCA8Q53HL2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 AC009779.1-201ENST00000551138 283 ntBASIC20.34■□□□□ 0.85
CDCA8Q53HL2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 AL645939.5-201ENST00000606834 243 ntBASIC20.34■□□□□ 0.85
CDCA8Q53HL2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 MIR6074-201ENST00000612054 107 ntBASIC20.34■□□□□ 0.85
CDCA8Q53HL2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 AL139099.5-201ENST00000635274 300 ntBASIC20.34■□□□□ 0.85
CDCA8Q53HL2 TNRC18P2-201ENST00000417666 2714 ntBASIC20.34■□□□□ 0.85
CDCA8Q53HL2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CDCA8Q53HL2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms