Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.61■□□□□ 0.09
PTPN20Q4JDL3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 KHSRPP1-201ENST00000427983 1768 ntBASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 CHMP1AP1-201ENST00000445563 662 ntBASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 AC104989.1-201ENST00000519711 778 ntBASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 AP006547.1-201ENST00000563435 692 ntBASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 ZACNP1-201ENST00000612259 710 ntBASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 AC008687.7-202ENST00000637404 953 ntBASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 AC117489.1-201ENST00000625169 3217 ntBASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN20Q4JDL3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 AC099336.1-201ENST00000417053 1171 ntBASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 AC022210.1-201ENST00000449856 793 ntBASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 GPR53P-205ENST00000457298 1084 ntBASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN20Q4JDL3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms