Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 LINC00554-201ENST00000564841 3011 ntBASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO4Q2I0M5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 JPT2-203ENST00000382711 894 ntTSL 4 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 MIR648-201ENST00000385046 94 ntBASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 AC108734.2-201ENST00000420887 1069 ntBASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 IGKV1OR-2-201ENST00000457995 350 ntBASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 AL590235.1-201ENST00000564650 861 ntBASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 MIR2392-201ENST00000584881 84 ntBASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO4Q2I0M5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 OR5BD1P-201ENST00000532527 817 ntBASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 AL118522.1-201ENST00000611368 560 ntBASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO4Q2I0M5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms