Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC19.22■□□□□ 0.67
COL16A1Q07092 DERL2-206ENST00000572834 589 ntTSL 3 BASIC19.22■□□□□ 0.67
COL16A1Q07092 RN7SL455P-201ENST00000580629 282 ntBASIC19.22■□□□□ 0.67
COL16A1Q07092 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
COL16A1Q07092 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC19.22■□□□□ 0.67
COL16A1Q07092 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.22■□□□□ 0.67
COL16A1Q07092 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC19.22■□□□□ 0.67
COL16A1Q07092 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COL16A1Q07092 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.22■□□□□ 0.67
COL16A1Q07092 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL16A1Q07092 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 GOLGA8UP-201ENST00000527159 1755 ntBASIC19.22■□□□□ 0.67
COL16A1Q07092 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.22■□□□□ 0.67
COL16A1Q07092 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COL16A1Q07092 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.22■□□□□ 0.67
COL16A1Q07092 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 RN7SKP212-201ENST00000410851 328 ntBASIC19.22■□□□□ 0.67
COL16A1Q07092 KRT18P44-201ENST00000416086 1285 ntBASIC19.22■□□□□ 0.67
COL16A1Q07092 AL359092.2-201ENST00000423330 585 ntBASIC19.22■□□□□ 0.67
COL16A1Q07092 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC19.22■□□□□ 0.67
COL16A1Q07092 AC093700.1-201ENST00000503348 717 ntBASIC19.22■□□□□ 0.67
COL16A1Q07092 OR52V1P-201ENST00000515557 898 ntBASIC19.22■□□□□ 0.67
COL16A1Q07092 RN7SL605P-201ENST00000577229 281 ntBASIC19.22■□□□□ 0.67
COL16A1Q07092 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC19.22■□□□□ 0.67
COL16A1Q07092 AL590556.2-202ENST00000636906 844 ntBASIC19.22■□□□□ 0.67
COL16A1Q07092 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL16A1Q07092 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
COL16A1Q07092 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 AC023024.2-201ENST00000623561 1993 ntBASIC19.21■□□□□ 0.67
COL16A1Q07092 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COL16A1Q07092 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.21■□□□□ 0.67
COL16A1Q07092 PCDH8P1-201ENST00000428983 2773 ntBASIC19.21■□□□□ 0.67
COL16A1Q07092 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
COL16A1Q07092 FZD10-202ENST00000539839 3282 ntBASIC19.21■□□□□ 0.67
COL16A1Q07092 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 U3.5-201ENST00000363448 216 ntBASIC19.21■□□□□ 0.67
COL16A1Q07092 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
COL16A1Q07092 TPT1P9-201ENST00000413759 514 ntBASIC19.21■□□□□ 0.67
COL16A1Q07092 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC19.21■□□□□ 0.67
COL16A1Q07092 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC19.21■□□□□ 0.67
COL16A1Q07092 FAM86JP-202ENST00000484500 988 ntBASIC19.21■□□□□ 0.67
COL16A1Q07092 PCDHA14-201ENST00000506751 2298 ntBASIC19.21■□□□□ 0.67
COL16A1Q07092 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COL16A1Q07092 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC19.21■□□□□ 0.67
COL16A1Q07092 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.21■□□□□ 0.67
COL16A1Q07092 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.21■□□□□ 0.67
COL16A1Q07092 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL16A1Q07092 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.21■□□□□ 0.67
COL16A1Q07092 RN7SL478P-201ENST00000584358 298 ntBASIC19.21■□□□□ 0.67
COL16A1Q07092 AC092850.2-201ENST00000623821 2697 ntBASIC19.21■□□□□ 0.67
COL16A1Q07092 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC19.21■□□□□ 0.67
COL16A1Q07092 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 AC005332.8-201ENST00000622750 2735 ntBASIC19.2■□□□□ 0.66
COL16A1Q07092 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COL16A1Q07092 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC19.2■□□□□ 0.66
COL16A1Q07092 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL16A1Q07092 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
COL16A1Q07092 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 GH1-203ENST00000351388 685 ntTSL 2 BASIC19.2■□□□□ 0.66
COL16A1Q07092 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC19.2■□□□□ 0.66
COL16A1Q07092 AC092810.2-201ENST00000431570 362 ntBASIC19.2■□□□□ 0.66
COL16A1Q07092 OR4C14P-201ENST00000440929 923 ntBASIC19.2■□□□□ 0.66
COL16A1Q07092 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC19.2■□□□□ 0.66
COL16A1Q07092 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC19.2■□□□□ 0.66
COL16A1Q07092 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC19.2■□□□□ 0.66
COL16A1Q07092 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC19.2■□□□□ 0.66
COL16A1Q07092 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC19.2■□□□□ 0.66
COL16A1Q07092 AL031673.1-201ENST00000611460 466 ntBASIC19.2■□□□□ 0.66
COL16A1Q07092 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC19.2■□□□□ 0.66
COL16A1Q07092 AD000864.1-201ENST00000624076 2295 ntBASIC19.2■□□□□ 0.66
COL16A1Q07092 AC112693.3-201ENST00000624819 1983 ntBASIC19.2■□□□□ 0.66
COL16A1Q07092 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL16A1Q07092 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms