Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.63□□□□□ -0.23
LTBQ06643 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.63□□□□□ -0.23
LTBQ06643 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.63□□□□□ -0.23
LTBQ06643 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.63□□□□□ -0.23
LTBQ06643 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.63□□□□□ -0.23
LTBQ06643 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LTBQ06643 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LTBQ06643 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
LTBQ06643 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
LTBQ06643 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.63□□□□□ -0.23
LTBQ06643 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.62□□□□□ -0.23
LTBQ06643 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.62□□□□□ -0.23
LTBQ06643 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.62□□□□□ -0.23
LTBQ06643 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.62□□□□□ -0.23
LTBQ06643 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.62□□□□□ -0.23
LTBQ06643 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.62□□□□□ -0.23
LTBQ06643 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.62□□□□□ -0.23
LTBQ06643 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.62□□□□□ -0.23
LTBQ06643 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.62□□□□□ -0.23
LTBQ06643 AC026434.2-201ENST00000506094 1078 ntBASIC13.62□□□□□ -0.23
LTBQ06643 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.62□□□□□ -0.23
LTBQ06643 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.62□□□□□ -0.23
LTBQ06643 AL583810.1-201ENST00000553344 1045 ntBASIC13.62□□□□□ -0.23
LTBQ06643 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.62□□□□□ -0.23
LTBQ06643 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.62□□□□□ -0.23
LTBQ06643 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.62□□□□□ -0.23
LTBQ06643 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LTBQ06643 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
LTBQ06643 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.62□□□□□ -0.23
LTBQ06643 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.62□□□□□ -0.23
LTBQ06643 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LTBQ06643 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LTBQ06643 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.62□□□□□ -0.23
LTBQ06643 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.62□□□□□ -0.23
LTBQ06643 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LTBQ06643 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTBQ06643 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.62□□□□□ -0.23
LTBQ06643 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.61□□□□□ -0.23
LTBQ06643 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LTBQ06643 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 ANKRD19P-201ENST00000338192 862 ntBASIC13.61□□□□□ -0.23
LTBQ06643 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
LTBQ06643 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.61□□□□□ -0.23
LTBQ06643 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.61□□□□□ -0.23
LTBQ06643 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LTBQ06643 KRT43P-201ENST00000434019 910 ntBASIC13.61□□□□□ -0.23
LTBQ06643 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms