Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 FAM58BP-201ENST00000439056 645 ntBASIC14.92□□□□□ -0.02
AP1S1P61966 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.92□□□□□ -0.02
AP1S1P61966 TPT1P11-201ENST00000458482 498 ntBASIC14.92□□□□□ -0.02
AP1S1P61966 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 E2F3P2-201ENST00000447755 1422 ntBASIC14.92□□□□□ -0.02
AP1S1P61966 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.91□□□□□ -0.02
AP1S1P61966 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.91□□□□□ -0.02
AP1S1P61966 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.91□□□□□ -0.02
AP1S1P61966 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.91□□□□□ -0.02
AP1S1P61966 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.91□□□□□ -0.02
AP1S1P61966 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 MIR663B-201ENST00000408361 115 ntBASIC14.91□□□□□ -0.02
AP1S1P61966 MIR1908-201ENST00000410394 80 ntBASIC14.91□□□□□ -0.02
AP1S1P61966 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.91□□□□□ -0.02
AP1S1P61966 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.91□□□□□ -0.02
AP1S1P61966 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.91□□□□□ -0.02
AP1S1P61966 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 AC022447.6-201ENST00000515522 438 ntBASIC14.91□□□□□ -0.02
AP1S1P61966 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.91□□□□□ -0.02
AP1S1P61966 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 AC091271.1-201ENST00000611877 1162 ntBASIC14.91□□□□□ -0.02
AP1S1P61966 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 AL096828.3-201ENST00000615354 462 ntBASIC14.91□□□□□ -0.02
AP1S1P61966 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.91□□□□□ -0.02
AP1S1P61966 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.91□□□□□ -0.02
AP1S1P61966 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.91□□□□□ -0.02
AP1S1P61966 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.91□□□□□ -0.02
AP1S1P61966 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
AP1S1P61966 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.91□□□□□ -0.02
AP1S1P61966 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 AC015688.4-201ENST00000580780 1647 ntBASIC14.91□□□□□ -0.02
AP1S1P61966 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 REXO1L6P-201ENST00000603433 1515 ntBASIC14.91□□□□□ -0.02
AP1S1P61966 AGGF1P1-201ENST00000509500 2073 ntBASIC14.91□□□□□ -0.02
AP1S1P61966 AC103702.1-201ENST00000548801 2630 ntBASIC14.91□□□□□ -0.02
AP1S1P61966 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
AP1S1P61966 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S1P61966 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S1P61966 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S1P61966 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
AP1S1P61966 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S1P61966 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S1P61966 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S1P61966 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms