Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.06□□□□□ -0.16
RPS3AP61247 TMEM261P1-201ENST00000604899 340 ntBASIC14.06□□□□□ -0.16
RPS3AP61247 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.06□□□□□ -0.16
RPS3AP61247 AC087386.2-201ENST00000623212 4637 ntBASIC14.06□□□□□ -0.16
RPS3AP61247 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.06□□□□□ -0.16
RPS3AP61247 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.06□□□□□ -0.16
RPS3AP61247 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RPS3AP61247 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.06□□□□□ -0.16
RPS3AP61247 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.06□□□□□ -0.16
RPS3AP61247 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPS3AP61247 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RPS3AP61247 AL121723.1-201ENST00000445194 1519 ntBASIC14.05□□□□□ -0.16
RPS3AP61247 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RPS3AP61247 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.05□□□□□ -0.16
RPS3AP61247 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RPS3AP61247 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RPS3AP61247 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.05□□□□□ -0.16
RPS3AP61247 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.05□□□□□ -0.16
RPS3AP61247 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.05□□□□□ -0.16
RPS3AP61247 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RPS3AP61247 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RPS3AP61247 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.05□□□□□ -0.16
RPS3AP61247 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.05□□□□□ -0.16
RPS3AP61247 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.05□□□□□ -0.16
RPS3AP61247 AC012645.4-201ENST00000610691 1061 ntBASIC14.05□□□□□ -0.16
RPS3AP61247 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RPS3AP61247 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 MTHFR-210ENST00000641407 2387 ntBASIC14.05□□□□□ -0.16
RPS3AP61247 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.05□□□□□ -0.16
RPS3AP61247 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.05□□□□□ -0.16
RPS3AP61247 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPS3AP61247 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.04□□□□□ -0.16
RPS3AP61247 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.04□□□□□ -0.16
RPS3AP61247 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.04□□□□□ -0.16
RPS3AP61247 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RPS3AP61247 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.04□□□□□ -0.16
RPS3AP61247 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RPS3AP61247 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.04□□□□□ -0.16
RPS3AP61247 KRT17P7-201ENST00000451704 1104 ntBASIC14.04□□□□□ -0.16
RPS3AP61247 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.04□□□□□ -0.16
RPS3AP61247 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.04□□□□□ -0.16
RPS3AP61247 AP005018.1-201ENST00000525475 301 ntBASIC14.04□□□□□ -0.16
RPS3AP61247 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.04□□□□□ -0.16
RPS3AP61247 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.04□□□□□ -0.16
RPS3AP61247 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.04□□□□□ -0.16
RPS3AP61247 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.04□□□□□ -0.16
RPS3AP61247 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.04□□□□□ -0.16
RPS3AP61247 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.04□□□□□ -0.16
RPS3AP61247 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.04□□□□□ -0.16
RPS3AP61247 AL596325.1-201ENST00000563991 1082 ntBASIC14.04□□□□□ -0.16
RPS3AP61247 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms