Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CDC42P60953 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC42P60953 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.66□□□□□ -0.22
CDC42P60953 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.66□□□□□ -0.22
CDC42P60953 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.66□□□□□ -0.22
CDC42P60953 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CDC42P60953 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDC42P60953 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC42P60953 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.66□□□□□ -0.22
CDC42P60953 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC42P60953 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC42P60953 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC42P60953 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.66□□□□□ -0.22
CDC42P60953 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CDC42P60953 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.65□□□□□ -0.22
CDC42P60953 AL627223.1-201ENST00000416693 442 ntBASIC13.65□□□□□ -0.22
CDC42P60953 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.65□□□□□ -0.22
CDC42P60953 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.65□□□□□ -0.22
CDC42P60953 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.65□□□□□ -0.22
CDC42P60953 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.65□□□□□ -0.22
CDC42P60953 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.65□□□□□ -0.22
CDC42P60953 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.65□□□□□ -0.22
CDC42P60953 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.65□□□□□ -0.22
CDC42P60953 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CDC42P60953 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.65□□□□□ -0.22
CDC42P60953 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDC42P60953 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.65□□□□□ -0.22
CDC42P60953 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDC42P60953 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDC42P60953 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
CDC42P60953 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC42P60953 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42P60953 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
CDC42P60953 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
CDC42P60953 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.64□□□□□ -0.23
CDC42P60953 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CDC42P60953 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42P60953 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42P60953 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42P60953 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42P60953 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CDC42P60953 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42P60953 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDC42P60953 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 RN7SL832P-201ENST00000607781 1756 ntBASIC13.64□□□□□ -0.23
CDC42P60953 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.64□□□□□ -0.23
CDC42P60953 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42P60953 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CDC42P60953 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.64□□□□□ -0.23
CDC42P60953 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.64□□□□□ -0.23
CDC42P60953 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.64□□□□□ -0.23
CDC42P60953 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CDC42P60953 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms