Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.33■□□□□ 0.36
RHBDL3P58872 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.33■□□□□ 0.36
RHBDL3P58872 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RHBDL3P58872 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.33■□□□□ 0.36
RHBDL3P58872 RPSAP15-201ENST00000448168 861 ntBASIC17.33■□□□□ 0.36
RHBDL3P58872 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.33■□□□□ 0.36
RHBDL3P58872 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.33■□□□□ 0.36
RHBDL3P58872 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.33■□□□□ 0.36
RHBDL3P58872 YRDCP1-201ENST00000621419 643 ntBASIC17.33■□□□□ 0.36
RHBDL3P58872 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
RHBDL3P58872 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.33■□□□□ 0.36
RHBDL3P58872 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
RHBDL3P58872 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RHBDL3P58872 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.33■□□□□ 0.36
RHBDL3P58872 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHBDL3P58872 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.32■□□□□ 0.36
RHBDL3P58872 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RHBDL3P58872 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
RHBDL3P58872 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RHBDL3P58872 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.32■□□□□ 0.36
RHBDL3P58872 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RHBDL3P58872 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 KRT8P31-201ENST00000504812 1408 ntBASIC17.32■□□□□ 0.36
RHBDL3P58872 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.32■□□□□ 0.36
RHBDL3P58872 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.32■□□□□ 0.36
RHBDL3P58872 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.32■□□□□ 0.36
RHBDL3P58872 AC092978.1-202ENST00000637590 1327 ntBASIC17.32■□□□□ 0.36
RHBDL3P58872 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RHBDL3P58872 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.32■□□□□ 0.36
RHBDL3P58872 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.32■□□□□ 0.36
RHBDL3P58872 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RHBDL3P58872 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.32■□□□□ 0.36
RHBDL3P58872 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RHBDL3P58872 RN7SL555P-201ENST00000584742 339 ntBASIC17.32■□□□□ 0.36
RHBDL3P58872 SIGLEC18P-201ENST00000602271 909 ntBASIC17.32■□□□□ 0.36
RHBDL3P58872 AC103810.10-201ENST00000606504 343 ntBASIC17.32■□□□□ 0.36
RHBDL3P58872 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RHBDL3P58872 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RHBDL3P58872 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.32■□□□□ 0.36
RHBDL3P58872 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RHBDL3P58872 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RHBDL3P58872 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RHBDL3P58872 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.31■□□□□ 0.36
RHBDL3P58872 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RHBDL3P58872 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RHBDL3P58872 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.31■□□□□ 0.36
RHBDL3P58872 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.31■□□□□ 0.36
RHBDL3P58872 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.31■□□□□ 0.36
RHBDL3P58872 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.31■□□□□ 0.36
RHBDL3P58872 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.31■□□□□ 0.36
RHBDL3P58872 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.31■□□□□ 0.36
RHBDL3P58872 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RHBDL3P58872 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.31■□□□□ 0.36
RHBDL3P58872 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.31■□□□□ 0.36
RHBDL3P58872 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.31■□□□□ 0.36
RHBDL3P58872 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RHBDL3P58872 AC092580.1-201ENST00000433998 658 ntBASIC17.31■□□□□ 0.36
RHBDL3P58872 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.31■□□□□ 0.36
RHBDL3P58872 NOC2LP1-201ENST00000450578 752 ntBASIC17.31■□□□□ 0.36
RHBDL3P58872 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.31■□□□□ 0.36
RHBDL3P58872 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms