Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN3P51790 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN3P51790 TSPY26P-202ENST00000565928 3884 ntBASIC16.23■□□□□ 0.19
CLCN3P51790 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN3P51790 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN3P51790 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CLCN3P51790 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN3P51790 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN3P51790 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 RN7SKP214-201ENST00000364208 315 ntBASIC16.23■□□□□ 0.19
CLCN3P51790 AL133466.1-201ENST00000447582 150 ntBASIC16.23■□□□□ 0.19
CLCN3P51790 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.23■□□□□ 0.19
CLCN3P51790 NUP210P1-202ENST00000504322 710 ntBASIC16.23■□□□□ 0.19
CLCN3P51790 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.23■□□□□ 0.19
CLCN3P51790 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN3P51790 RBM8B-201ENST00000555532 525 ntBASIC16.23■□□□□ 0.19
CLCN3P51790 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CLCN3P51790 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.23■□□□□ 0.19
CLCN3P51790 AC104640.1-201ENST00000562617 2109 ntBASIC16.23■□□□□ 0.19
CLCN3P51790 FGFR3P5-201ENST00000564496 886 ntBASIC16.23■□□□□ 0.19
CLCN3P51790 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN3P51790 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.23■□□□□ 0.19
CLCN3P51790 AC106872.11-201ENST00000605838 421 ntBASIC16.23■□□□□ 0.19
CLCN3P51790 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
CLCN3P51790 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLCN3P51790 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.23■□□□□ 0.19
CLCN3P51790 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLCN3P51790 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLCN3P51790 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLCN3P51790 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CLCN3P51790 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLCN3P51790 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLCN3P51790 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 AC046158.3-201ENST00000624947 2558 ntBASIC16.22■□□□□ 0.19
CLCN3P51790 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLCN3P51790 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 AC078875.1-201ENST00000431907 724 ntBASIC16.22■□□□□ 0.19
CLCN3P51790 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCN3P51790 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.22■□□□□ 0.19
CLCN3P51790 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCN3P51790 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCN3P51790 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.22■□□□□ 0.19
CLCN3P51790 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.22■□□□□ 0.19
CLCN3P51790 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.22■□□□□ 0.19
CLCN3P51790 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLCN3P51790 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms