Protein–RNA interactions for Protein: P46531

NOTCH1, Neurogenic locus notch homolog protein 1, humanhuman

Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1P46531 AL590235.1-201ENST00000564650 861 ntBASIC10.87□□□□□ -0.67
NOTCH1P46531 RN7SL357P-201ENST00000581065 298 ntBASIC10.87□□□□□ -0.67
NOTCH1P46531 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC10.87□□□□□ -0.67
NOTCH1P46531 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
NOTCH1P46531 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC10.87□□□□□ -0.67
NOTCH1P46531 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC10.86□□□□□ -0.67
NOTCH1P46531 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC10.86□□□□□ -0.67
NOTCH1P46531 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 AC098934.1-203ENST00000442868 1262 ntBASIC10.86□□□□□ -0.67
NOTCH1P46531 ERP29P1-201ENST00000442902 706 ntBASIC10.86□□□□□ -0.67
NOTCH1P46531 RGS5-216ENST00000449680 788 ntTSL 3 BASIC10.86□□□□□ -0.67
NOTCH1P46531 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 AC068831.5-201ENST00000557387 328 ntBASIC10.86□□□□□ -0.67
NOTCH1P46531 AC013553.1-201ENST00000560906 267 ntBASIC10.86□□□□□ -0.67
NOTCH1P46531 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC10.86□□□□□ -0.67
NOTCH1P46531 BX088702.1-201ENST00000610784 235 ntBASIC10.86□□□□□ -0.67
NOTCH1P46531 PHF23-213ENST00000613632 850 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
NOTCH1P46531 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 AC106827.1-201ENST00000366454 431 ntBASIC10.86□□□□□ -0.67
NOTCH1P46531 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 NQO2-204ENST00000380454 851 ntTSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 SALL4P5-201ENST00000419001 1760 ntBASIC10.86□□□□□ -0.67
NOTCH1P46531 KRT8P30-201ENST00000432100 650 ntBASIC10.86□□□□□ -0.67
NOTCH1P46531 VENTXP4-201ENST00000449029 958 ntBASIC10.86□□□□□ -0.67
NOTCH1P46531 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 CISD2-202ENST00000503643 808 ntTSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC10.86□□□□□ -0.67
NOTCH1P46531 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NOTCH1P46531 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
NOTCH1P46531 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms