Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GDNFP39905 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 AC015911.4-201ENST00000588022 1070 ntBASIC13.03□□□□□ -0.32
GDNFP39905 TEX28P1-201ENST00000613479 1221 ntBASIC13.03□□□□□ -0.32
GDNFP39905 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GDNFP39905 TEX28P2-201ENST00000617764 1221 ntBASIC13.03□□□□□ -0.32
GDNFP39905 AC073592.8-201ENST00000624126 511 ntBASIC13.03□□□□□ -0.32
GDNFP39905 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 AC090505.1-201ENST00000430515 1834 ntBASIC13.03□□□□□ -0.32
GDNFP39905 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
GDNFP39905 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GDNFP39905 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.03□□□□□ -0.32
GDNFP39905 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
GDNFP39905 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.03□□□□□ -0.32
GDNFP39905 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
GDNFP39905 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GDNFP39905 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.03□□□□□ -0.32
GDNFP39905 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GDNFP39905 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GDNFP39905 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GDNFP39905 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
GDNFP39905 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.02□□□□□ -0.32
GDNFP39905 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GDNFP39905 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.02□□□□□ -0.32
GDNFP39905 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GDNFP39905 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
GDNFP39905 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GDNFP39905 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
GDNFP39905 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.02□□□□□ -0.33
GDNFP39905 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GDNFP39905 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GDNFP39905 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GDNFP39905 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GDNFP39905 FO393414.2-201ENST00000405153 598 ntBASIC13.02□□□□□ -0.33
GDNFP39905 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.02□□□□□ -0.33
GDNFP39905 AC074338.1-201ENST00000416825 156 ntBASIC13.02□□□□□ -0.33
GDNFP39905 AC107890.1-201ENST00000422478 521 ntBASIC13.02□□□□□ -0.33
GDNFP39905 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.02□□□□□ -0.33
GDNFP39905 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.02□□□□□ -0.33
GDNFP39905 FAM86GP-201ENST00000448322 971 ntBASIC13.02□□□□□ -0.33
GDNFP39905 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.02□□□□□ -0.33
GDNFP39905 AC069120.2-201ENST00000524091 540 ntBASIC13.02□□□□□ -0.33
GDNFP39905 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.02□□□□□ -0.33
GDNFP39905 AC140878.1-201ENST00000565277 250 ntBASIC13.02□□□□□ -0.33
GDNFP39905 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.02□□□□□ -0.33
GDNFP39905 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.02□□□□□ -0.33
GDNFP39905 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.02□□□□□ -0.33
GDNFP39905 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
GDNFP39905 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GDNFP39905 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
GDNFP39905 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
GDNFP39905 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
GDNFP39905 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GDNFP39905 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GDNFP39905 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
GDNFP39905 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
GDNFP39905 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GDNFP39905 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GDNFP39905 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.02□□□□□ -0.33
GDNFP39905 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
GDNFP39905 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
GDNFP39905 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
GDNFP39905 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
GDNFP39905 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
GDNFP39905 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
GDNFP39905 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 TARDBPP1-201ENST00000442013 1203 ntBASIC13.01□□□□□ -0.33
GDNFP39905 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.01□□□□□ -0.33
GDNFP39905 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.01□□□□□ -0.33
GDNFP39905 AC092183.1-201ENST00000469884 875 ntBASIC13.01□□□□□ -0.33
GDNFP39905 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 HLA-V-204ENST00000476601 1289 ntBASIC13.01□□□□□ -0.33
GDNFP39905 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 AC097493.3-201ENST00000509725 367 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms